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PIGL phosphatidylinositol glycan anchor biosynthesis class L [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102038000, updated on 3-Aug-2024

Summary

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Gene symbol
PIGL
Gene description
phosphatidylinositol glycan anchor biosynthesis class L
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See PIGL in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054368.1 (3380744..3433079, complement)

NW_005054368.1Genomic Context describing neighboring genes Neighboring gene ubiquitin C Neighboring gene centromere protein V Neighboring gene nuclear receptor corepressor 1 Neighboring gene tetratricopeptide repeat domain 19

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054368 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosaminylphosphatidylinositol deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054368.1 Reference GeoFor_1.0

    Range
    3380744..3433079 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031059781.1 → XP_030915641.1  N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase

    UniProtKB/TrEMBL
    A0A8N5EW90
    Conserved Domains (1) summary
    cl00929
    Location:1 → 173
    PIG-L; GlcNAc-PI de-N-acetylase
Nucleotide Protein
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