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FNIP1 folliculin interacting protein 1 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102037932, updated on 3-Aug-2024

Summary

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Gene symbol
FNIP1
Gene description
folliculin interacting protein 1
See related
Ensembl:ENSGFOG00000002025
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See FNIP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054308.1 (2065447..2109975)

NW_005054308.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase long chain family member 6 Neighboring gene meiotic kinetochore factor Neighboring gene Rap guanine nucleotide exchange factor 6 Neighboring gene follistatin like 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054308 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-folding chaperone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
folliculin-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054308.1 Reference GeoFor_1.0

    Range
    2065447..2109975
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005418680.3 → XP_005418737.1  folliculin-interacting protein 1

    UniProtKB/TrEMBL
    A0A6I9HDN8
    Related
    ENSGFOP00000002921.1, ENSGFOT00000002988.1
    Conserved Domains (3) summary
    pfam14636
    Location:14 → 131
    FNIP_N; Folliculin-interacting protein N-terminus
    pfam14637
    Location:292 → 524
    FNIP_M; Folliculin-interacting protein middle domain
    pfam14638
    Location:954 → 1140
    FNIP_C; Folliculin-interacting protein C-terminus
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials