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AGPS alkylglycerone phosphate synthase [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102036620, updated on 3-Aug-2024

Summary

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Gene symbol
AGPS
Gene description
alkylglycerone phosphate synthase
See related
Ensembl:ENSGFOG00000006623
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See AGPS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054298.1 (20718124..20758921)

NW_005054298.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A3 Neighboring gene NFE2 like bZIP transcription factor 2 Neighboring gene tetratricopeptide repeat protein 30A Neighboring gene phosphodiesterase 11A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054298 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alkylglycerone-phosphate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkyldihydroxyacetonephosphate synthase, peroxisomal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054298.1 Reference GeoFor_1.0

    Range
    20718124..20758921
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031058491.1 → XP_030914351.1  alkyldihydroxyacetonephosphate synthase, peroxisomal

    UniProtKB/TrEMBL
    A0A8N5ETT5
    Related
    ENSGFOP00000010093.1, ENSGFOT00000010428.1
    Conserved Domains (1) summary
    COG0277
    Location:181 → 632
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
Nucleotide Protein
Heading Accession and Version

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