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ETNPPL ethanolamine-phosphate phospho-lyase [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102035271, updated on 3-Aug-2024

Summary

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Gene symbol
ETNPPL
Gene description
ethanolamine-phosphate phospho-lyase
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See ETNPPL in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054304.1 (13670415..13682594)

NW_005054304.1Genomic Context describing neighboring genes Neighboring gene SEC24 homolog B, COPII coat complex component Neighboring gene collagen type XXV alpha 1 chain Neighboring gene ribosomal protein L34 Neighboring gene oligosaccharyltransferase complex non-catalytic subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054304 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ethanolamine-phosphate phospho-lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethanolamine-phosphate phospho-lyase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054304.1 Reference GeoFor_1.0

    Range
    13670415..13682594
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005418164.1 → XP_005418221.1  ethanolamine-phosphate phospho-lyase

    UniProtKB/TrEMBL
    A0A6I9HEG4
    Conserved Domains (1) summary
    PRK06148
    Location:1 → 396
    PRK06148; hypothetical protein; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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