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ALPL alkaline phosphatase, biomineralization associated [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102034305, updated on 3-Aug-2024

Summary

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Gene symbol
ALPL
Gene description
alkaline phosphatase, biomineralization associated
See related
Ensembl:ENSGFOG00000008795
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See ALPL in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054475.1 (312477..318836, complement)

NW_005054475.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115948687 Neighboring gene RAP1 GTPase activating protein Neighboring gene endothelin converting enzyme 1 Neighboring gene eukaryotic translation initiation factor 4 gamma 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054475 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alkaline phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline phosphatase, tissue-nonspecific isozyme
Names
alkaline phosphatase, liver/bone/kidney

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054475.1 Reference GeoFor_1.0

    Range
    312477..318836 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014309996.1 → XP_014165471.1  alkaline phosphatase, tissue-nonspecific isozyme

    UniProtKB/TrEMBL
    A0A6I9ZCT4
    Related
    ENSGFOP00000012928.1, ENSGFOT00000013362.1
    Conserved Domains (1) summary
    pfam00245
    Location:1 → 387
    Alk_phosphatase; Alkaline phosphatase
Nucleotide Protein
Heading Accession and Version

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