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CH25H cholesterol 25-hydroxylase [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102033532, updated on 3-Aug-2024

Summary

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Gene symbol
CH25H
Gene description
cholesterol 25-hydroxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See CH25H in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054300.1 (9028454..9029881)

NW_005054300.1Genomic Context describing neighboring genes Neighboring gene interferon-induced protein with tetratricopeptide repeats 5-like Neighboring gene lipase A, lysosomal acid type Neighboring gene Fas cell surface death receptor Neighboring gene actin alpha 2, smooth muscle

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054300 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-4 methylsterol oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholesterol 25-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054300.1 Reference GeoFor_1.0

    Range
    9028454..9029881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005416465.2 → XP_005416522.1  cholesterol 25-hydroxylase

    UniProtKB/TrEMBL
    A0A6I9HCH9
    Conserved Domains (1) summary
    pfam04116
    Location:132 → 267
    FA_hydroxylase; Fatty acid hydroxylase superfamily
Nucleotide Protein
Heading Accession and Version

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