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PLPP5 phospholipid phosphatase 5 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102031751, updated on 3-Aug-2024

Summary

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Gene symbol
PLPP5
Gene description
phospholipid phosphatase 5
See related
Ensembl:ENSGFOG00000003700
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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See PLPP5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054597.1 (419763..430370, complement)

NW_005054597.1Genomic Context describing neighboring genes Neighboring gene BAG cochaperone 4 Neighboring gene DDHD domain containing 2 Neighboring gene nuclear receptor binding SET domain protein 3 Neighboring gene leucine zipper and EF-hand containing transmembrane protein 2 Neighboring gene fibroblast growth factor receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054597 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid phosphatase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054597.1 Reference GeoFor_1.0

    Range
    419763..430370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014310852.2 → XP_014166327.1  phospholipid phosphatase 5 isoform X2

    UniProtKB/TrEMBL
    A0A6I9Z957
    Conserved Domains (1) summary
    cd03390
    Location:58 → 246
    PAP2_containing_1_like; PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both ...

  2. XM_005430062.3 → XP_005430119.2  phospholipid phosphatase 5 isoform X1

    UniProtKB/TrEMBL
    A0A6I9HU51
    Related
    ENSGFOP00000005218.1, ENSGFOT00000005362.1
    Conserved Domains (1) summary
    cd03390
    Location:17 → 205
    PAP2_containing_1_like; PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both ...
Nucleotide Protein
Heading Accession and Version

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