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GALK1 galactokinase 1 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102031505, updated on 3-Aug-2024

Summary

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Gene symbol
GALK1
Gene description
galactokinase 1
See related
Ensembl:ENSGFOG00000008270
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See GALK1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054370.1 (2350182..2354446)

NW_005054370.1Genomic Context describing neighboring genes Neighboring gene histone H3.3 Neighboring gene uncharacterized LOC115948282 Neighboring gene integrin subunit beta 4 Neighboring gene SAP30 binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054370 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactokinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054370.1 Reference GeoFor_1.0

    Range
    2350182..2354446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005424617.2 → XP_005424674.1  galactokinase

    UniProtKB/TrEMBL
    A0A6I9HN81
    Related
    ENSGFOP00000011932.1, ENSGFOT00000012344.1
    Conserved Domains (1) summary
    PRK05101
    Location:1 → 348
    PRK05101; galactokinase; Provisional
Nucleotide Protein
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