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Mrps5 mitochondrial ribosomal protein S5 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 102000740, updated on 10-Mar-2024

Summary

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Gene symbol
Mrps5
Gene description
mitochondrial ribosomal protein S5
See related
Ensembl:ENSMOCG00000001710
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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See Mrps5 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) 14 Unlocalized Scaffold NW_004949096.1 (35983609..36001543)

NW_004949096.1Genomic Context describing neighboring genes Neighboring gene prominin 2 Neighboring gene zinc finger protein 2-like Neighboring gene zinc finger protein 2 Neighboring gene 40S ribosomal protein S6 pseudogene Neighboring gene mal, T cell differentiation protein Neighboring gene 40S ribosomal protein S7 pseudogene Neighboring gene mal, T cell differentiation protein like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004949096 Chromosome 14 Unlocalized Scaffold Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
28S ribosomal protein S5, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NW_004949096.1 Reference MicOch1.0

    Range
    35983609..36001543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005364441.2 → XP_005364498.1  28S ribosomal protein S5, mitochondrial

    Related
    ENSMOCP00000002182.1, ENSMOCT00000002307.1
    Conserved Domains (3) summary
    TIGR01021
    Location:218 → 373
    rpsE_bact; ribosomal protein S5, bacterial/organelle type
    pfam00333
    Location:219 → 284
    Ribosomal_S5; Ribosomal protein S5, N-terminal domain
    pfam03719
    Location:298 → 366
    Ribosomal_S5_C; Ribosomal protein S5, C-terminal domain
Nucleotide Protein
Heading Accession and Version

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