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Sars1 seryl-tRNA synthetase 1 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101978335, updated on 8-Mar-2024

Summary

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Gene symbol
Sars1
Gene description
seryl-tRNA synthetase 1
Locus tag
H1C71_032019
See related
EnsemblRapid:ENSSTOG00015012303
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Also known as
Sars
Orthologs
human mouse all
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Genomic context

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See Sars1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405058.1 (19347165..19367040, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936704.1 (747109..766981)

NW_024405058.1Genomic Context describing neighboring genes Neighboring gene proline and serine rich coiled-coil 1 Neighboring gene cadherin EGF LAG seven-pass G-type receptor 2 Neighboring gene uncharacterized LOC120890543 Neighboring gene endosome-lysosome associated apoptosis and autophagy regulator 1 Neighboring gene small nucleolar RNA U13 Neighboring gene cilia and flagella associated protein 276

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in seryl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405058.1 Reference HiC_Itri_2 Primary Assembly

    Range
    19347165..19367040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005338078.3 → XP_005338135.1  serine--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    A0A287D5I5
    Related
    ENSSTOP00015015020.1, ENSSTOT00015016517.1
    Conserved Domains (1) summary
    PLN02678
    Location:3 → 486
    PLN02678; seryl-tRNA synthetase
Nucleotide Protein
Heading Accession and Version

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