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RNU6-8 RNA, U6 small nuclear 8 [ Homo sapiens (human) ]

Gene ID: 101954278, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-8provided by HGNC
Official Full Name
RNA, U6 small nuclear 8provided by HGNC
Primary source
HGNC:HGNC:34285
See related
Ensembl:ENSG00000202337 AllianceGenome:HGNC:34285
Gene type
snRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U6-8
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Genomic context

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Location:
14q12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (32203163..32203269, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (26400790..26400896, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (32672369..32672475, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 9862 Neighboring gene Rho GTPase activating protein 5 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr14:32596327-32597277 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8238 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8239 Neighboring gene H3K27ac hESC enhancer GRCh37_chr14:32672100-32672645 Neighboring gene H3K27ac hESC enhancer GRCh37_chr14:32672646-32673190 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8240 Neighboring gene RNA, U6 small nuclear 7 Neighboring gene HERV-FRD provirus ancestral Env polyprotein pseudogene Neighboring gene KIAA1143 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multiple, dispersed human U6 small nuclear RNA genes with varied transcriptional efficiencies. Domitrovich AM, et al. Nucleic Acids Res, 2003 May 1. PMID 12711679, Free PMC Article
  2. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. Choudhury NR, et al. BMC Biol, 2017 Nov 8. PMID 29117863, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104088.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL161665
    Related
    ENST00000365467.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    32203163..32203269 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    26400790..26400896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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