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CHST8 carbohydrate sulfotransferase 8 [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101953399, updated on 3-Dec-2024

Summary

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Gene symbol
CHST8
Gene description
carbohydrate sulfotransferase 8
See related
Ensembl:ENSCPBG00000001302
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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See CHST8 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 14 NC_088804.1 (25992020..26270094)
103 previous assembly Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) 15 NC_024229.2 (19430586..19710141, complement)

Chromosome 14 - NC_088804.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122173909 Neighboring gene CCAAT enhancer binding protein gamma Neighboring gene peptidase D Neighboring gene mediator of RNA polymerase II transcription subunit 15-like Neighboring gene uncharacterized LOC135975623 Neighboring gene uncharacterized LOC112059382 Neighboring gene transcription initiation factor TFIID subunit 4-like Neighboring gene potassium channel tetramerization domain containing 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088804.1 Reference ASM1138683v2

    Range
    25992020..26270094
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065567190.1 → XP_065423262.1  carbohydrate sulfotransferase 8 isoform X3

    UniProtKB/TrEMBL
    A0A8C3F1X5

  2. XM_005289919.5 → XP_005289976.1  carbohydrate sulfotransferase 8 isoform X2

    UniProtKB/TrEMBL
    A0A8C3F1X5
    Conserved Domains (1) summary
    pfam03567
    Location:212 → 441
    Sulfotransfer_2; Sulfotransferase family

  3. XM_024104154.3 → XP_023959922.1  carbohydrate sulfotransferase 8 isoform X1

    UniProtKB/TrEMBL
    A0A8C3F1X5
    Conserved Domains (1) summary
    pfam03567
    Location:211 → 440
    Sulfotransfer_2; Sulfotransferase family

  4. XM_065567191.1 → XP_065423263.1  carbohydrate sulfotransferase 8 isoform X3

    UniProtKB/TrEMBL
    A0A8C3F1X5

  5. XM_065567192.1 → XP_065423264.1  carbohydrate sulfotransferase 8 isoform X4

    UniProtKB/TrEMBL
    A0A8C3F1X5

  6. XM_005289922.5 → XP_005289979.1  carbohydrate sulfotransferase 8 isoform X4

    See identical proteins and their annotated locations for XP_005289979.1

    UniProtKB/TrEMBL
    A0A8C3F1X5
    Conserved Domains (1) summary
    pfam03567
    Location:153 → 382
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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