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SLC11A1 solute carrier family 11 member 1 [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101952697, updated on 12-Jun-2024

Summary

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Gene symbol
SLC11A1
Gene description
solute carrier family 11 member 1
See related
Ensembl:ENSCPBG00000013259
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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See SLC11A1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 11 NC_088801.1 (2949166..2969878, complement)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281341.1 (1665518..1690575, complement)

Chromosome 11 - NC_088801.1Genomic Context describing neighboring genes Neighboring gene villin 1 Neighboring gene CTD small phosphatase 1 Neighboring gene ciliogenesis associated TTC17 interacting protein Neighboring gene PNKD metallo-beta-lactamase domain containing

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadmium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal cation:proton antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in metal ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to lipopolysaccharide IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in phagocytic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
natural resistance-associated macrophage protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088801.1 Reference ASM1138683v2

    Range
    2949166..2969878 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005279725.5 → XP_005279782.2  natural resistance-associated macrophage protein 1 isoform X2

  2. XM_042843019.2 → XP_042698953.2  natural resistance-associated macrophage protein 1 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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