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CHST3 carbohydrate sulfotransferase 3 [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101950540, updated on 1-Aug-2024

Summary

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Gene symbol
CHST3
Gene description
carbohydrate sulfotransferase 3
See related
Ensembl:ENSCPBG00000025937
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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See CHST3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 7 NC_088797.1 (86165895..86251437, complement)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281430.1 (2656342..2700191)

Chromosome 7 - NC_088797.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122174347 Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene prosaposin-like Neighboring gene prosaposin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088797.1 Reference ASM1138683v2

    Range
    86165895..86251437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042856890.2 → XP_042712824.1  carbohydrate sulfotransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C3IR21
    Conserved Domains (1) summary
    cl21551
    Location:247 → 432
    Sulfotransfer_3; Sulfotransferase family

  2. XM_042856891.2 → XP_042712825.1  carbohydrate sulfotransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0AAJ8CHG1

  3. XM_042856892.2 → XP_042712826.1  carbohydrate sulfotransferase 3 isoform X3

    UniProtKB/TrEMBL
    A0AAJ8CHD5

  4. XM_005281880.4 → XP_005281937.1  carbohydrate sulfotransferase 3 isoform X1

    See identical proteins and their annotated locations for XP_005281937.1

    UniProtKB/TrEMBL
    A0A8C3IR21
    Conserved Domains (1) summary
    cl21551
    Location:247 → 432
    Sulfotransfer_3; Sulfotransferase family

  5. XM_024108657.3 → XP_023964425.1  carbohydrate sulfotransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C3IR21
    Conserved Domains (1) summary
    cl21551
    Location:247 → 432
    Sulfotransfer_3; Sulfotransferase family

  6. XM_042856893.2 → XP_042712827.1  carbohydrate sulfotransferase 3 isoform X4

    UniProtKB/TrEMBL
    A0AAJ8CHQ6

  7. XM_005281882.4 → XP_005281939.1  carbohydrate sulfotransferase 3 isoform X1

    See identical proteins and their annotated locations for XP_005281939.1

    UniProtKB/TrEMBL
    A0A8C3IR21
    Related
    ENSCPBP00000037444.1
    Conserved Domains (1) summary
    cl21551
    Location:247 → 432
    Sulfotransfer_3; Sulfotransferase family

  8. XM_008172002.4 → XP_008170224.1  carbohydrate sulfotransferase 3 isoform X1

    See identical proteins and their annotated locations for XP_008170224.1

    UniProtKB/TrEMBL
    A0A8C3IR21
    Conserved Domains (1) summary
    cl21551
    Location:247 → 432
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
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