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EXT2 exostosin glycosyltransferase 2 [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101949276, updated on 10-Oct-2024

Summary

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Gene symbol
EXT2
Gene description
exostosin glycosyltransferase 2
See related
Ensembl:ENSCPBG00000012585
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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See EXT2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 4 NC_088794.1 (80580787..80684045)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) 4 NC_024221.1 (24972443..25078186)

Chromosome 4 - NC_088794.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135983110 Neighboring gene 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) Neighboring gene ALX homeobox 4 Neighboring gene uncharacterized LOC135983111

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088794.1 Reference ASM1138683v2

    Range
    80580787..80684045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008179788.4 → XP_008178010.2  exostosin-2 isoform X1

  2. XM_024100469.3 → XP_023956237.2  exostosin-2 isoform X2

  3. XM_008179792.4 → XP_008178014.1  exostosin-2 isoform X3

    UniProtKB/TrEMBL
    A0A8C3HEV9, A0AAJ6SUH9
    Related
    ENSCPBP00000017123.1
    Conserved Domains (2) summary
    pfam03016
    Location:100 → 386
    Exostosin; Exostosin family
    pfam09258
    Location:462 → 703
    Glyco_transf_64; Glycosyl transferase family 64 domain

  4. XM_065592793.1 → XP_065448865.1  exostosin-2 isoform X5

    UniProtKB/TrEMBL
    A0A8C3P497

  5. XM_042849184.2 → XP_042705118.2  exostosin-2 isoform X4

  6. XM_065592794.1 → XP_065448866.1  exostosin-2 isoform X6

  7. XM_065592797.1 → XP_065448869.1  exostosin-2 isoform X7

  8. XM_065592795.1 → XP_065448867.1  exostosin-2 isoform X3

    UniProtKB/TrEMBL
    A0A8C3HEV9

  9. XM_065592796.1 → XP_065448868.1  exostosin-2 isoform X5

    UniProtKB/TrEMBL
    A0A8C3P497
Nucleotide Protein
Heading Accession and Version

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