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MAN1A2 mannosidase alpha class 1A member 2 [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101948035, updated on 1-Aug-2024

Summary

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Gene symbol
MAN1A2
Gene description
mannosidase alpha class 1A member 2
See related
Ensembl:ENSCPBG00000000822
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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See MAN1A2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 1 NC_088791.1 (145781925..146082000)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) 1 NC_024218.1 (13852204..14142930)

Chromosome 1 - NC_088791.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135976527 Neighboring gene calcium sensing receptor Neighboring gene SRRM2 protein homolog rsr-2-like Neighboring gene signal peptide peptidase-like 2B Neighboring gene 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase-like Neighboring gene zinc finger protein 697

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose trimming involved in glycoprotein ERAD pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannosyl-oligosaccharide 1,2-alpha-mannosidase IB

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088791.1 Reference ASM1138683v2

    Range
    145781925..146082000
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042852063.2 → XP_042707997.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IB isoform X4

    UniProtKB/TrEMBL
    A0AAJ7YHN8
    Conserved Domains (1) summary
    cl04955
    Location:26 → 479
    LanC_like; Cyclases involved in the biosynthesis of lantibiotics, and similar proteins

  2. XM_005292739.4 → XP_005292796.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IB isoform X1

    UniProtKB/TrEMBL
    A0A8C3F090
    Related
    ENSCPBP00000001017.1
    Conserved Domains (2) summary
    pfam01532
    Location:189 → 628
    Glyco_hydro_47; Glycosyl hydrolase family 47
    cl21478
    Location:111 → 153
    ATP-synt_B; ATP synthase B/B' CF(0)

  3. XM_005292740.4 → XP_005292797.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IB isoform X2

    UniProtKB/TrEMBL
    A0A8C3EZZ1
    Related
    ENSCPBP00000001029.1
    Conserved Domains (2) summary
    pfam01532
    Location:189 → 601
    Glyco_hydro_47; Glycosyl hydrolase family 47
    cl21478
    Location:111 → 153
    ATP-synt_B; ATP synthase B/B' CF(0)

  4. XM_065586306.1 → XP_065442378.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IB isoform X3

RNA

  1. XR_255681.4 RNA Sequence

  2. XR_010599037.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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