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EIF3D eukaryotic translation initiation factor 3 subunit D [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101940179, updated on 1-Aug-2024

Summary

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Gene symbol
EIF3D
Gene description
eukaryotic translation initiation factor 3 subunit D
See related
Ensembl:ENSCPBG00000016309
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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See EIF3D in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 1 NC_088791.1 (96014409..96025388)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281810.1 (44204..55082)

Chromosome 1 - NC_088791.1Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel auxiliary subunit gamma 2 Neighboring gene myb/SANT-like DNA-binding domain-containing protein 2 Neighboring gene FAD dependent oxidoreductase domain containing 2 Neighboring gene thioredoxin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation initiation factor 3 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 3 subunit D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088791.1 Reference ASM1138683v2

    Range
    96014409..96025388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005312936.4 → XP_005312993.1  eukaryotic translation initiation factor 3 subunit D isoform X2

    UniProtKB/TrEMBL
    A0A8C3HSK3, A0A8C3P846
    Related
    ENSCPBP00000022826.1
    Conserved Domains (1) summary
    pfam05091
    Location:4 → 521
    eIF-3_zeta; Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)

  2. XM_005312935.4 → XP_005312992.1  eukaryotic translation initiation factor 3 subunit D isoform X1

    UniProtKB/TrEMBL
    A0A8C3HSK3, A0AAJ6RUU8
    Conserved Domains (1) summary
    pfam05091
    Location:4 → 522
    eIF-3_zeta; Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
Nucleotide Protein
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