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CTBP1 C-terminal binding protein 1 [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101937446, updated on 12-Jun-2024

Summary

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Gene symbol
CTBP1
Gene description
C-terminal binding protein 1
See related
Ensembl:ENSCPBG00000000892
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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See CTBP1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 5 NC_088795.1 (127564184..127980863)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281369.1 (3476959..3902774)

Chromosome 5 - NC_088795.1Genomic Context describing neighboring genes Neighboring gene UV stimulated scaffold protein A Neighboring gene uncharacterized LOC135984018 Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene uncharacterized LOC135984019 Neighboring gene SRRM2 protein homolog rsr-2-like Neighboring gene spondin 2 Neighboring gene transmembrane emp24 domain-containing protein 11-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088795.1 Reference ASM1138683v2

    Range
    127564184..127980863
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065597190.1 → XP_065453262.1  C-terminal-binding protein 1 isoform X14

  2. XM_042855560.2 → XP_042711494.1  C-terminal-binding protein 1 isoform X2

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_065597166.1 → XP_065453238.1  C-terminal-binding protein 1 isoform X2

  4. XM_024106468.3 → XP_023962236.1  C-terminal-binding protein 1 isoform X2

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  5. XM_065597189.1 → XP_065453261.1  C-terminal-binding protein 1 isoform X14

  6. XM_065597176.1 → XP_065453248.1  C-terminal-binding protein 1 isoform X8

  7. XM_065597174.1 → XP_065453246.1  C-terminal-binding protein 1 isoform X8

  8. XM_065597194.1 → XP_065453266.1  C-terminal-binding protein 1 isoform X15

  9. XM_065597175.1 → XP_065453247.1  C-terminal-binding protein 1 isoform X8

  10. XM_065597188.1 → XP_065453260.1  C-terminal-binding protein 1 isoform X14

  11. XM_065597184.1 → XP_065453256.1  C-terminal-binding protein 1 isoform X12

  12. XM_065597169.1 → XP_065453241.1  C-terminal-binding protein 1 isoform X4

  13. XM_065597193.1 → XP_065453265.1  C-terminal-binding protein 1 isoform X15

  14. XM_065597197.1 → XP_065453269.1  C-terminal-binding protein 1 isoform X16

  15. XM_065597180.1 → XP_065453252.1  C-terminal-binding protein 1 isoform X10

  16. XM_065597185.1 → XP_065453257.1  C-terminal-binding protein 1 isoform X12

  17. XM_005292416.5 → XP_005292473.1  C-terminal-binding protein 1 isoform X2

    See identical proteins and their annotated locations for XP_005292473.1

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  18. XM_065597170.1 → XP_065453242.1  C-terminal-binding protein 1 isoform X4

  19. XM_065597187.1 → XP_065453259.1  C-terminal-binding protein 1 isoform X14

  20. XM_005292419.5 → XP_005292476.1  C-terminal-binding protein 1 isoform X8

    See identical proteins and their annotated locations for XP_005292476.1

    Conserved Domains (1) summary
    cd05299
    Location:26 → 344
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  21. XM_005292414.5 → XP_005292471.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C3EZV8
    Related
    ENSCPBP00000001148.1
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  22. XM_005292420.5 → XP_005292477.1  C-terminal-binding protein 1 isoform X14

    UniProtKB/TrEMBL
    A0A8C3F0K8
    Related
    ENSCPBP00000001171.1
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  23. XM_065597195.1 → XP_065453267.1  C-terminal-binding protein 1 isoform X16

  24. XM_065597200.1 → XP_065453272.1  C-terminal-binding protein 1 isoform X18

  25. XM_065597191.1 → XP_065453263.1  C-terminal-binding protein 1 isoform X15

  26. XM_065597198.1 → XP_065453270.1  C-terminal-binding protein 1 isoform X17

  27. XM_065597173.1 → XP_065453245.1  C-terminal-binding protein 1 isoform X8

  28. XM_065597167.1 → XP_065453239.1  C-terminal-binding protein 1 isoform X3

  29. XM_065597183.1 → XP_065453255.1  C-terminal-binding protein 1 isoform X12

  30. XM_065597178.1 → XP_065453250.1  C-terminal-binding protein 1 isoform X10

  31. XM_065597182.1 → XP_065453254.1  C-terminal-binding protein 1 isoform X12

  32. XM_065597171.1 → XP_065453243.1  C-terminal-binding protein 1 isoform X5

  33. XM_065597192.1 → XP_065453264.1  C-terminal-binding protein 1 isoform X15

  34. XM_005292417.5 → XP_005292474.1  C-terminal-binding protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8C3H5M7
    Related
    ENSCPBP00000001161.1
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  35. XM_065597172.1 → XP_065453244.1  C-terminal-binding protein 1 isoform X7

  36. XM_065597177.1 → XP_065453249.1  C-terminal-binding protein 1 isoform X9

  37. XM_065597181.1 → XP_065453253.1  C-terminal-binding protein 1 isoform X11

  38. XM_065597196.1 → XP_065453268.1  C-terminal-binding protein 1 isoform X16

  39. XM_065597199.1 → XP_065453271.1  C-terminal-binding protein 1 isoform X17

  40. XM_065597179.1 → XP_065453251.1  C-terminal-binding protein 1 isoform X10

  41. XM_065597203.1 → XP_065453275.1  C-terminal-binding protein 1 isoform X18

  42. XM_065597202.1 → XP_065453274.1  C-terminal-binding protein 1 isoform X18

  43. XM_065597206.1 → XP_065453278.1  C-terminal-binding protein 1 isoform X19

  44. XM_065597208.1 → XP_065453280.1  C-terminal-binding protein 1 isoform X20

  45. XM_065597186.1 → XP_065453258.1  C-terminal-binding protein 1 isoform X13

  46. XM_065597205.1 → XP_065453277.1  C-terminal-binding protein 1 isoform X18

  47. XM_065597209.1 → XP_065453281.1  C-terminal-binding protein 1 isoform X20

  48. XM_065597204.1 → XP_065453276.1  C-terminal-binding protein 1 isoform X18

  49. XM_065597207.1 → XP_065453279.1  C-terminal-binding protein 1 isoform X19

  50. XM_065597201.1 → XP_065453273.1  C-terminal-binding protein 1 isoform X18

Nucleotide Protein
Heading Accession and Version

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