U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FNTA farnesyltransferase, CAAX box, subunit alpha [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101934158, updated on 6-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
FNTA
Gene description
farnesyltransferase, CAAX box, subunit alpha
See related
Ensembl:ENSCPBG00000027524
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See FNTA in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 6 NC_088796.1 (127962961..127984924, complement)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281455.1 (1410997..1433190)

Chromosome 6 - NC_088796.1Genomic Context describing neighboring genes Neighboring gene zinc finger and SCAN domain-containing protein 29-like Neighboring gene potassium channel modulatory factor 1 Neighboring gene fucosyltransferase 10 Neighboring gene neuregulin 1 Neighboring gene uncharacterized LOC135972308

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CAAX-protein geranylgeranyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein farnesyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein farnesylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein geranylgeranylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CAAX-protein geranylgeranyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein farnesyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Names
farnesyltransferase, CAAX box, alpha

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088796.1 Reference ASM1138683v2

    Range
    127962961..127984924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042859155.2 → XP_042715089.2  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha isoform X2

  2. XM_005278877.5 → XP_005278934.2  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.