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B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101933681, updated on 1-Aug-2024

Summary

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Gene symbol
B3GALNT2
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 2
See related
Ensembl:ENSCPBG00000004334
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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See B3GALNT2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 3 NC_088793.1 (133930083..133969019, complement)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281370.1 (1722928..1760969)

Chromosome 3 - NC_088793.1Genomic Context describing neighboring genes Neighboring gene tubulin folding cofactor E Neighboring gene uncharacterized LOC101934325 Neighboring gene uncharacterized LOC135982666 Neighboring gene G protein subunit gamma 4 Neighboring gene lysosomal trafficking regulator Neighboring gene uncharacterized LOC135982425

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088793.1 Reference ASM1138683v2

    Range
    133930083..133969019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005291194.5 → XP_005291251.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C3F9K4, A0AAJ6W6V2
    Related
    ENSCPBP00000005422.1
    Conserved Domains (1) summary
    cl21608
    Location:322 → 451
    Galactosyl_T; Galactosyltransferase

  2. XM_042848367.2 → XP_042704301.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    A0AAJ7YAV2

  3. XM_005291193.5 → XP_005291250.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C3F9K4, A0AAJ6RAY8
    Conserved Domains (1) summary
    cl21608
    Location:322 → 449
    Galactosyl_T; Galactosyltransferase

RNA

  1. XR_010600179.1 RNA Sequence

  2. XR_010600178.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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