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LOC101929861 uncharacterized LOC101929861 [ Homo sapiens (human) ]

Gene ID: 101929861, updated on 22-Oct-2024

Summary

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Gene symbol
LOC101929861
Gene description
uncharacterized LOC101929861
See related
Ensembl:ENSG00000226506
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.6) See more
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Genomic context

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See LOC101929861 in Genome Data Viewer
Location:
2p25.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (7867382..7869314, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (7891587..7893468, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:7876672-7877871 Neighboring gene proteasome 20S subunit beta 1 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15249 Neighboring gene uncharacterized LOC105373408 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:7981304-7981492 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:8012515-8013028 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:8013029-8013542 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:8013543-8014056 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:8018173-8018687 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:8018688-8019201 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:8019202-8019716 Neighboring gene uncharacterized LOC105373409 Neighboring gene uncharacterized LOC101929551 Neighboring gene long intergenic non-protein coding RNA 298 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:8098775-8098955 Neighboring gene uncharacterized LOC124907727

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    7867382..7869314 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_922753.3 RNA Sequence

    Related
    ENST00000815063.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    7891587..7893468 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007071543.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials