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LOC101929653 uncharacterized LOC101929653 [ Homo sapiens (human) ]

Gene ID: 101929653, updated on 10-Oct-2023

Summary

Gene symbol
LOC101929653
Gene description
uncharacterized LOC101929653
See related
Ensembl:ENSG00000237654
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
11q25
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (131533857..131540867, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (131569729..131576738, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (131403751..131410761, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902794 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:131211673-131212872 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:131243973-131244635 Neighboring gene RNA, U6atac small nuclear 12, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:131317907-131318407 Neighboring gene Sharpr-MPRA regulatory region 1894 Neighboring gene neurotrimin Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:131454209-131455006 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5759 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:131533266-131533822 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:131540246-131540746 Neighboring gene Sharpr-MPRA regulatory region 15285 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:131547556-131548159 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:131549985-131550486 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:131550487-131550986 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:131551806-131552306 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:131552307-131552807 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4083 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:131560563-131561086 Neighboring gene NTM antisense RNA 1 Neighboring gene GPN-loop GTPase 1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110140.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP003025
    Related
    ENST00000414466.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    131533857..131540867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    131569729..131576738 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)