U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101929617 uncharacterized LOC101929617 [ Homo sapiens (human) ]

Gene ID: 101929617, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
LOC101929617
Gene description
uncharacterized LOC101929617
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward brain (RPKM 1.5) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC101929617 in Genome Data Viewer
Location:
5p14.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (22754483..22758305)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (22860585..22865917)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene cadherin 12 Neighboring gene uncharacterized LOC105374682 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:22473807-22475006 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:22480518-22480675 Neighboring gene uncharacterized LOC105374681 Neighboring gene glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 2 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:22744411-22744586 Neighboring gene NANOG hESC enhancer GRCh37_chr5:22835757-22836258 Neighboring gene uncharacterized LOC105374686 Neighboring gene Sharpr-MPRA regulatory region 1276 Neighboring gene uncharacterized LOC105374687 Neighboring gene Sharpr-MPRA regulatory region 8980

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    22754483..22758305
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_241750.6 RNA Sequence

  2. XR_241749.6 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    22860585..22865917
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007075527.1 RNA Sequence

  2. XR_007075528.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials