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LOC101929536 uncharacterized LOC101929536 [ Homo sapiens (human) ]

Gene ID: 101929536, updated on 10-Oct-2023

Summary

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Gene symbol
LOC101929536
Gene description
uncharacterized LOC101929536
See related
Ensembl:ENSG00000261798
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
1p34.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (39788976..39790171)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (39658426..39659621)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (40254648..40255843)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene bone morphogenetic protein 8b Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:40236393-40237066 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:40237067-40237739 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 817 Neighboring gene 3-oxoacid CoA-transferase 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:40244416-40244916 Neighboring gene BMP8B antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:40254643-40255144 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 818 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 819 Neighboring gene uncharacterized LOC130932201 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:40265165-40265697 Neighboring gene long intergenic non-protein coding RNA 2811 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:40282415-40283410 Neighboring gene uncharacterized LOC105378667 Neighboring gene MPRA-validated peak189 silencer

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_135805.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC040967
    Related
    ENST00000566366.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    39788976..39790171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    39658426..39659621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases