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LOC101929492 uncharacterized LOC101929492 [ Homo sapiens (human) ]

Gene ID: 101929492, updated on 17-Sep-2024

Summary

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Gene symbol
LOC101929492
Gene description
uncharacterized LOC101929492
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC101929492 in Genome Data Viewer
Location:
8p12
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (31274791..31401123)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (31555939..31682301)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379358 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:31096419-31097041 Neighboring gene potassium channel tetramerization domain containing 9 pseudogene 6 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:31165622-31166821 Neighboring gene MPRA-validated peak6984 silencer Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:31336175-31337006 Neighboring gene uncharacterized LOC105379360 Neighboring gene RNA, 5S ribosomal pseudogene 261

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. Comuzzie AG, et al. PLoS One, 2012. PMID 23251661, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

EBI GWAS Catalog

Description
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
EBI GWAS Catalog

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    31274791..31401123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_949649.3 RNA Sequence

  2. XR_247156.3 RNA Sequence

  3. XR_247157.3 RNA Sequence

  4. XR_001745865.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    31555939..31682301
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078858.1 RNA Sequence

  2. XR_007078857.1 RNA Sequence

  3. XR_007078856.1 RNA Sequence

  4. XR_007078859.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Research Materials