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P3H2-AS1 P3H2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101929152, updated on 10-Oct-2023

Summary

Official Symbol
P3H2-AS1provided by HGNC
Official Full Name
P3H2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40886
See related
Ensembl:ENSG00000225764 AllianceGenome:HGNC:40886
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LEPREL1-AS1
Expression
Biased expression in kidney (RPKM 7.9), spleen (RPKM 3.5) and 2 other tissues See more
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Genomic context

See P3H2-AS1 in Genome Data Viewer
Location:
3q28
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (190120964..190144846)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (192937330..192961162)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (189838753..189862635)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene tumor protein p63 Neighboring gene microRNA 944 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:189652551-189653750 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:189655039-189656238 Neighboring gene methylthioadenosine phosphorylase pseudogene 2 Neighboring gene prolyl 3-hydroxylase 2 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:189759008-189759690 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14998 Neighboring gene Sharpr-MPRA regulatory region 7173 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14999 Neighboring gene Sharpr-MPRA regulatory region 10063 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20983 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:189879699-189880410 Neighboring gene RNA, U6 small nuclear 1109, pseudogene Neighboring gene NMNAT1 pseudogene 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126419.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC067718, AC099660
    Related
    ENST00000412203.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    190120964..190144846
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    192937330..192961162
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)