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LOC101928797 uncharacterized LOC101928797 [ Homo sapiens (human) ]

Gene ID: 101928797, updated on 17-Sep-2024

Summary

Gene symbol
LOC101928797
Gene description
uncharacterized LOC101928797
See related
Ensembl:ENSG00000233569
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC101928797 in Genome Data Viewer
Location:
9q33.1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (117648606..117657027)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (129842440..129850860)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (120410884..120419305)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene astrotactin 2 Neighboring gene RN7SK pseudogene 125 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:120117495-120117996 Neighboring gene uncharacterized LOC105376242 Neighboring gene uncharacterized LOC124902330 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28886 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:120311686-120312295 Neighboring gene NANOG hESC enhancer GRCh37_chr9:120449653-120450182 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:120466103-120467302 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:120467367-120468566 Neighboring gene RNA, U6 small nuclear 1082, pseudogene Neighboring gene ribosomal protein L35a pseudogene 22 Neighboring gene toll like receptor 4

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_109806.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC034724
    Related
    ENST00000450938.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    117648606..117657027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    129842440..129850860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)