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LOC101928748 uncharacterized LOC101928748 [ Homo sapiens (human) ]

Gene ID: 101928748, updated on 17-Sep-2024

Summary

Gene symbol
LOC101928748
Gene description
uncharacterized LOC101928748
See related
Ensembl:ENSG00000236461
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC101928748 in Genome Data Viewer
Location:
9q33.1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (115119539..115138409, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (127311847..127330711, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (117881818..117900688, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:117656118-117657317 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:117669626-117670248 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr9:117670249-117670870 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:117691965-117692524 Neighboring gene TNF superfamily member 8 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28881 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:117797665-117798864 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28882 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:117825442-117826641 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:117827001-117827743 Neighboring gene uncharacterized LOC124902256 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:117838052-117838579 Neighboring gene tenascin C Neighboring gene uncharacterized LOC124902255 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:117876192-117877391 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:117880715-117881534 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:117894654-117895154 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:117895155-117895655 Neighboring gene uncharacterized LOC124902257 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:117944498-117945043 Neighboring gene deleted in esophageal cancer 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20218 Neighboring gene NANOG hESC enhancer GRCh37_chr9:117955993-117956512 Neighboring gene uncharacterized LOC105376233

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110950.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL162425, BC034316
    Related
    ENST00000423637.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    115119539..115138409 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    127311847..127330711 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)