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LOC101928277 uncharacterized LOC101928277 [ Homo sapiens (human) ]

Gene ID: 101928277, updated on 17-Sep-2024

Summary

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Gene symbol
LOC101928277
Gene description
uncharacterized LOC101928277
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC101928277 in Genome Data Viewer
Location:
6q23.2-q23.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (134673889..134879364, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (135862133..136067643, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:134855294-134856493 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:134858047-134859246 Neighboring gene long intergenic non-protein coding RNA 3002 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:134905935-134906540 Neighboring gene family with sequence similarity 8 member A6, pseudogene Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr6:134982153-134982990 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_90067 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:135027094-135027688 Neighboring gene NANOG hESC enhancer GRCh37_chr6:135171948-135172481 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25091 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25092 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25093 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25094 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25095 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:135226183-135226682 Neighboring gene MEMO1 pseudogene 2 Neighboring gene MPRA-validated peak6134 silencer Neighboring gene aldehyde dehydrogenase 8 family member A1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    134673889..134879364 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001744364.2 RNA Sequence

  2. XR_001744363.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    135862133..136067643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007077155.1 RNA Sequence

  2. XR_007077154.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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