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LOC101928008 uncharacterized LOC101928008 [ Homo sapiens (human) ]

Gene ID: 101928008, updated on 10-Oct-2023

Summary

Gene symbol
LOC101928008
Gene description
uncharacterized LOC101928008
See related
Ensembl:ENSG00000255476
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
11p15.4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (9839142..9929263)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (9923529..10013658)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (9860689..9950810)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105369149 Neighboring gene SBF2 antisense RNA 1 Neighboring gene protein GVQW1-like Neighboring gene SET binding factor 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4426 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:9884465-9885024 Neighboring gene RNA, U7 small nuclear 28 pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:9915190-9915690 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:9915691-9916191 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:9927555-9928139 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:10004023-10005222 Neighboring gene glutamate-ammonia ligase pseudogene 2 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:10065715-10066914 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:10098213-10098818 Neighboring gene G protein subunit gamma 10 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_120539.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC026250, U80769
    Related
    ENST00000533659.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    9839142..9929263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    9923529..10013658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)