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LOC101927897 uncharacterized LOC101927897 [ Homo sapiens (human) ]

Gene ID: 101927897, updated on 17-Sep-2024

Summary

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Gene symbol
LOC101927897
Gene description
uncharacterized LOC101927897
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC101927897 in Genome Data Viewer
Location:
18q23
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (79457527..79465863, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (79710430..79719540, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene nuclear factor of activated T cells 1 Neighboring gene octapeptide-repeat protein T2 Neighboring gene uncharacterized LOC124904334 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:77203425-77204271 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13540 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9575 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13541 Neighboring gene uncharacterized LOC107985162 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:77230027-77230530 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_50638 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13542 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13543 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13544 Neighboring gene uncharacterized LOC102723506

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    79457527..79465863 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001753515.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    79710430..79719540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088539.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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