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LOC101927374 uncharacterized LOC101927374 [ Homo sapiens (human) ]

Gene ID: 101927374, updated on 10-Oct-2023

Summary

Gene symbol
LOC101927374
Gene description
uncharacterized LOC101927374
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
3p12.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (79411727..79435227)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (79466576..79490078)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (79460877..79484377)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene roundabout guidance receptor 1 Neighboring gene Sharpr-MPRA regulatory region 7147 Neighboring gene ribosomal protein S12 pseudogene 6 Neighboring gene Sharpr-MPRA regulatory region 6803 Neighboring gene NANOG hESC enhancer GRCh37_chr3:79006574-79007156 Neighboring gene VISTA enhancer hs1475 Neighboring gene RNA, 7SL, cytoplasmic 751, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:79174827-79175326 Neighboring gene NANOG hESC enhancer GRCh37_chr3:79209960-79210461 Neighboring gene microRNA 3923 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:79667239-79668438 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:79914289-79914466 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:79986556-79987112 Neighboring gene high mobility group box 1 pseudogene 38

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110133.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC117461, AK094694

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    79411727..79435227
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    79466576..79490078
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)