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LOC101927237 uncharacterized LOC101927237 [ Homo sapiens (human) ]

Gene ID: 101927237, updated on 10-Oct-2023

Summary

Gene symbol
LOC101927237
Gene description
uncharacterized LOC101927237
See related
Ensembl:ENSG00000250075
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
4q13.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (67417305..67422000, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (70860401..70865103, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (68283023..68287718, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene ribosomal protein S23 pseudogene 3 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:67430296-67431495 Neighboring gene NANOG hESC enhancer GRCh37_chr4:67472478-67473056 Neighboring gene uncharacterized LOC105377262 Neighboring gene RNA, U6 small nuclear 699, pseudogene Neighboring gene MPRA-validated peak5041 silencer Neighboring gene MPRA-validated peak5042 silencer Neighboring gene Sharpr-MPRA regulatory region 9439 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:68157353-68158552 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:68263965-68264720 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:68264721-68265476 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:68265477-68266232 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:68266233-68266986 Neighboring gene RNA, 5S ribosomal pseudogene 527 Neighboring gene RNA, U1 small nuclear 63, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110747.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC104806, AK093203
    Related
    ENST00000502400.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    67417305..67422000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    70860401..70865103 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)