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SMPDL3A sphingomyelin phosphodiesterase acid like 3A [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101926681, updated on 1-Aug-2024

Summary

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Gene symbol
SMPDL3A
Gene description
sphingomyelin phosphodiesterase acid like 3A
See related
Ensembl:ENSMFAG00000043472
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SMPDL3A in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 4 NC_088378.1 (26748945..26768517)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 4 NC_052258.1 (141744583..141764167, complement)

Chromosome 4 - NC_088378.1Genomic Context describing neighboring genes Neighboring gene cAMP-dependent protein kinase inhibitor beta Neighboring gene uncharacterized LOC102144028 Neighboring gene uncharacterized LOC123572843 Neighboring gene fatty acid binding protein 7 Neighboring gene clavesin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingomyelin phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sphingomyelin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic GMP-AMP phosphodiesterase SMPDL3A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088378.1 Reference T2T-MFA8v1.0

    Range
    26748945..26768517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065543275.1 → XP_065399347.1  cyclic GMP-AMP phosphodiesterase SMPDL3A isoform X1

    UniProtKB/TrEMBL
    A0A7N9DD17

  2. XM_005551712.4 → XP_005551769.2  cyclic GMP-AMP phosphodiesterase SMPDL3A isoform X2

    UniProtKB/TrEMBL
    G7P391

  3. XM_045391594.2 → XP_045247529.2  cyclic GMP-AMP phosphodiesterase SMPDL3A isoform X3

    UniProtKB/TrEMBL
    A0A2K5VG13
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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