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ATG10 autophagy related 10 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101926563, updated on 10-Oct-2024

Summary

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Gene symbol
ATG10
Gene description
autophagy related 10
See related
Ensembl:ENSMFAG00000031807
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ATG10 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 6 NC_088380.1 (85875913..86181762)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 6 NC_052260.1 (77243231..77547963)

Chromosome 6 - NC_088380.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135971119 Neighboring gene uncharacterized LOC123573990 Neighboring gene V-type proton ATPase subunit S1-like protein Neighboring gene ribosomal protein S23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Atg12 transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein lipidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein modification by small protein conjugation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-like-conjugating enzyme ATG10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088380.1 Reference T2T-MFA8v1.0

    Range
    85875913..86181762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065546451.1 → XP_065402523.1  ubiquitin-like-conjugating enzyme ATG10 isoform X1

    UniProtKB/TrEMBL
    A0A2K5UY59

  2. XM_065546455.1 → XP_065402527.1  ubiquitin-like-conjugating enzyme ATG10 isoform X5

  3. XM_065546456.1 → XP_065402528.1  ubiquitin-like-conjugating enzyme ATG10 isoform X6

  4. XM_045393974.2 → XP_045249909.1  ubiquitin-like-conjugating enzyme ATG10 isoform X2

  5. XM_065546465.1 → XP_065402537.1  ubiquitin-like-conjugating enzyme ATG10 isoform X8

  6. XM_065546453.1 → XP_065402525.1  ubiquitin-like-conjugating enzyme ATG10 isoform X4

    UniProtKB/TrEMBL
    A0A7N9CNU5

  7. XM_065546463.1 → XP_065402535.1  ubiquitin-like-conjugating enzyme ATG10 isoform X8

  8. XM_065546454.1 → XP_065402526.1  ubiquitin-like-conjugating enzyme ATG10 isoform X4

    UniProtKB/TrEMBL
    A0A7N9CNU5

  9. XM_065546467.1 → XP_065402539.1  ubiquitin-like-conjugating enzyme ATG10 isoform X8

  10. XM_045393980.2 → XP_045249915.1  ubiquitin-like-conjugating enzyme ATG10 isoform X4

    UniProtKB/TrEMBL
    A0A7N9CNU5
    Conserved Domains (1) summary
    pfam03987
    Location:12 → 207
    Autophagy_act_C; Autophagocytosis associated protein, active-site domain

  11. XM_065546461.1 → XP_065402533.1  ubiquitin-like-conjugating enzyme ATG10 isoform X8

  12. XM_045393983.2 → XP_045249918.1  ubiquitin-like-conjugating enzyme ATG10 isoform X4

    UniProtKB/TrEMBL
    A0A7N9CNU5
    Conserved Domains (1) summary
    pfam03987
    Location:12 → 207
    Autophagy_act_C; Autophagocytosis associated protein, active-site domain

  13. XM_005557307.4 → XP_005557364.1  ubiquitin-like-conjugating enzyme ATG10 isoform X3

    See identical proteins and their annotated locations for XP_005557364.1

    UniProtKB/TrEMBL
    A0A7N9D2Y2, G7P7W0
    Conserved Domains (1) summary
    pfam03987
    Location:112 → 179
    Autophagy_act_C; Autophagocytosis associated protein, active-site domain

  14. XM_045393976.2 → XP_045249911.1  ubiquitin-like-conjugating enzyme ATG10 isoform X4

    UniProtKB/TrEMBL
    A0A7N9CNU5
    Conserved Domains (1) summary
    pfam03987
    Location:12 → 207
    Autophagy_act_C; Autophagocytosis associated protein, active-site domain

  15. XM_065546458.1 → XP_065402530.1  ubiquitin-like-conjugating enzyme ATG10 isoform X8

  16. XM_065546457.1 → XP_065402529.1  ubiquitin-like-conjugating enzyme ATG10 isoform X7

  17. XM_065546459.1 → XP_065402531.1  ubiquitin-like-conjugating enzyme ATG10 isoform X8

  18. XM_065546452.1 → XP_065402524.1  ubiquitin-like-conjugating enzyme ATG10 isoform X4

    UniProtKB/TrEMBL
    A0A7N9CNU5

  19. XM_045393981.2 → XP_045249916.1  ubiquitin-like-conjugating enzyme ATG10 isoform X4

    UniProtKB/TrEMBL
    A0A7N9CNU5
    Conserved Domains (1) summary
    pfam03987
    Location:12 → 207
    Autophagy_act_C; Autophagocytosis associated protein, active-site domain

  20. XM_005557310.4 → XP_005557367.1  ubiquitin-like-conjugating enzyme ATG10 isoform X4

    See identical proteins and their annotated locations for XP_005557367.1

    UniProtKB/TrEMBL
    A0A7N9CNU5, G7P7W0
    Conserved Domains (1) summary
    pfam03987
    Location:12 → 207
    Autophagy_act_C; Autophagocytosis associated protein, active-site domain

  21. XM_065546464.1 → XP_065402536.1  ubiquitin-like-conjugating enzyme ATG10 isoform X8

  22. XM_005557308.4 → XP_005557365.1  ubiquitin-like-conjugating enzyme ATG10 isoform X4

    See identical proteins and their annotated locations for XP_005557365.1

    UniProtKB/TrEMBL
    A0A7N9CNU5, G7P7W0
    Conserved Domains (1) summary
    pfam03987
    Location:12 → 207
    Autophagy_act_C; Autophagocytosis associated protein, active-site domain

  23. XM_065546460.1 → XP_065402532.1  ubiquitin-like-conjugating enzyme ATG10 isoform X8

  24. XM_065546462.1 → XP_065402534.1  ubiquitin-like-conjugating enzyme ATG10 isoform X8

RNA

  1. XR_010587430.1 RNA Sequence

  2. XR_010587431.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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