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LIN9 lin-9 DREAM MuvB core complex component [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101925602, updated on 7-Jun-2024

Summary

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Gene symbol
LIN9
Gene description
lin-9 DREAM MuvB core complex component
See related
Ensembl:ENSMFAG00000001110
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See LIN9 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 1 NC_088375.1 (84134627..84223427, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 1 NC_052255.1 (83625663..83713738, complement)

Chromosome 1 - NC_088375.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135970272 Neighboring gene large ribosomal subunit protein eL34-like Neighboring gene Mix paired-like homeobox Neighboring gene small nucleolar RNA U13 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC102122451

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription repressor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein lin-9 homolog
Names
Protein lin-9 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088375.1 Reference T2T-MFA8v1.0

    Range
    84134627..84223427 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045397820.2 → XP_045253755.1  protein lin-9 homolog isoform X4

    Conserved Domains (1) summary
    pfam06584
    Location:108 → 212
    DIRP

  2. XM_065542721.1 → XP_065398793.1  protein lin-9 homolog isoform X3

  3. XM_045397814.2 → XP_045253749.1  protein lin-9 homolog isoform X2

    Conserved Domains (1) summary
    pfam06584
    Location:143 → 247
    DIRP

  4. XM_065542707.1 → XP_065398779.1  protein lin-9 homolog isoform X1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001319456.1: Suppressed sequence

    Description
    NM_001319456.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q4R8N2.1 GenPept UniProtKB/Swiss-Prot:Q4R8N2

Gene LinkOut

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