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THUMPD2 THUMP domain containing 2 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101925510, updated on 7-Jun-2024

Summary

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Gene symbol
THUMPD2
Gene description
THUMP domain containing 2
See related
Ensembl:ENSMFAG00000031464
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See THUMPD2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 13 NC_088387.1 (82383523..82424256)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 13 NC_052267.1 (67269168..67309925)

Chromosome 13 - NC_088387.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene uncharacterized LOC102125250 Neighboring gene solute carrier family 8 member A1 Neighboring gene transmembrane protein 178A Neighboring gene elongation factor 1-alpha 1-like Neighboring gene mitogen-activated protein kinase kinase kinase kinase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA (guanine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THUMP domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088387.1 Reference T2T-MFA8v1.0

    Range
    82383523..82424256
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005576036.4 → XP_005576093.3  THUMP domain-containing protein 2 isoform X1

  2. XM_005576037.3 → XP_005576094.3  THUMP domain-containing protein 2 isoform X2

  3. XM_005576038.4 → XP_005576095.3  THUMP domain-containing protein 2 isoform X3

  4. XM_065527160.1 → XP_065383232.1  THUMP domain-containing protein 2 isoform X4

  5. XM_045368601.2 → XP_045224536.2  THUMP domain-containing protein 2 isoform X5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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