U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SELP selectin P [ Falco peregrinus (peregrine falcon) ]

Gene ID: 101918900, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
SELP
Gene description
selectin P
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco peregrinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SELP in Genome Data Viewer
Location:
chromosome: 10
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_04 current bFalPer1.pri (GCF_023634155.1) 10 NC_073730.1 (10128619..10139056, complement)
102 previous assembly F_peregrinus_v1.0 (GCF_000337955.1) Unplaced Scaffold NW_004930009.1 (790015..800202)

Chromosome 10 - NC_073730.1Genomic Context describing neighboring genes Neighboring gene olfactomedin like 2B Neighboring gene activating transcription factor 6 Neighboring gene 1-phosphatidylinositol phosphodiesterase-like Neighboring gene HIV-1 Tat interactive protein 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oligosaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sialic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte tethering or rolling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to cytokine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
P-selectin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_023634155.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalPer1.pri Primary Assembly

Genomic

  1. NC_073730.1 Reference bFalPer1.pri Primary Assembly

    Range
    10128619..10139056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027781902.2 → XP_027637703.1  P-selectin isoform X2

  2. XM_055815082.1 → XP_055671057.1  P-selectin isoform X7

  3. XM_055815081.1 → XP_055671056.1  P-selectin isoform X5

  4. XM_027781904.2 → XP_027637705.1  P-selectin isoform X6

  5. XM_055815080.1 → XP_055671055.1  P-selectin isoform X4

  6. XM_013296538.3 → XP_013151992.1  P-selectin isoform X3

    Conserved Domains (4) summary
    cd00033
    Location:262 → 320
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:42 → 160
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:198 → 443
    PHA02927; secreted complement-binding protein; Provisional
    cd00054
    Location:168 → 196
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  7. XM_013296537.3 → XP_013151991.1  P-selectin isoform X1

    Conserved Domains (4) summary
    cd00033
    Location:262 → 320
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:42 → 160
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:198 → 443
    PHA02927; secreted complement-binding protein; Provisional
    cd00054
    Location:168 → 196
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.