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ACOD1 aconitate decarboxylase 1 [ Falco peregrinus (peregrine falcon) ]

Gene ID: 101916577, updated on 3-Aug-2024

Summary

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Gene symbol
ACOD1
Gene description
aconitate decarboxylase 1
See related
EnsemblRapid:ENSFPEG00020000127
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco peregrinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
Orthologs
human mouse all
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Genomic context

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See ACOD1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_04 current bFalPer1.pri (GCF_023634155.1) 4 NC_073724.1 (76569456..76577178, complement)
102 previous assembly F_peregrinus_v1.0 (GCF_000337955.1) Unplaced Scaffold NW_004929978.1 (2001996..2010422, complement)

Chromosome 4 - NC_073724.1Genomic Context describing neighboring genes Neighboring gene glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial Neighboring gene CLN5 intracellular trafficking protein Neighboring gene potassium channel tetramerization domain containing 12 Neighboring gene uncharacterized LOC129784285

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cis-aconitate decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023634155.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalPer1.pri Primary Assembly

Genomic

  1. NC_073724.1 Reference bFalPer1.pri Primary Assembly

    Range
    76569456..76577178 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005233455.4 → XP_005233512.2  cis-aconitate decarboxylase

    Related
    ENSFPEP00020000192.1, ENSFPET00020000193.1
Nucleotide Protein
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