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CGB_D3470W dolichyl-phosphate-mannose-protein mannosyltransferase, putative [ Cryptococcus gattii WM276 ]

Gene ID: 10191213, updated on 6-Jun-2024

Summary

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Gene symbol
CGB_D3470W
Gene description
dolichyl-phosphate-mannose-protein mannosyltransferase, putative
Locus tag
CGB_D3470W
See related
FungiDB:CGB_D3470W; VEuPathDB:CGB_D3470W
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus gattii WM276 (strain: WM276, serotype: B)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex
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Genomic context

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See CGB_D3470W in Genome Data Viewer
Location:
chromosome: D
Exon count:
7
Sequence:
Chromosome: D; NC_014941.1 (815882..818555)

Chromosome D - NC_014941.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene meiotic recombination-related protein, putative Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014941.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. D'Souza CA, et al. mBio, 2011. PMID 21304167, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-phosphate-mannose-protein mannosyltransferase, putative
XP_003193487.1
  • Similar to TIGR gene model, INSD accession AAW42985.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014941.1 Reference assembly

    Range
    815882..818555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003193439.1 → XP_003193487.1  dolichyl-phosphate-mannose-protein mannosyltransferase, putative [Cryptococcus gattii WM276]

    See identical proteins and their annotated locations for XP_003193487.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E6R3P8
    Conserved Domains (4) summary
    smart00472
    Location:329 → 385
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:28 → 759
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:54 → 299
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:539 → 753
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase
Nucleotide Protein
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