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CGB_G0300C Alpha-1,3-glucan synthase, putative [ Cryptococcus gattii WM276 ]

Gene ID: 10190845, updated on 6-Jun-2024

Summary

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Gene symbol
CGB_G0300C
Gene description
Alpha-1,3-glucan synthase, putative
Locus tag
CGB_G0300C
See related
FungiDB:CGB_G0300C; VEuPathDB:CGB_G0300C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus gattii WM276 (strain: WM276, serotype: B)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex
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Genomic context

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See CGB_G0300C in Genome Data Viewer
Location:
chromosome: G
Exon count:
14
Sequence:
Chromosome: G; NC_014944.1 (80406..88392, complement)

Chromosome G - NC_014944.1Genomic Context describing neighboring genes Neighboring gene Hypothetical Protein Neighboring gene Hypothetical protein Neighboring gene Hypothetical protein Neighboring gene Hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014944.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. D'Souza CA, et al. mBio, 2011. PMID 21304167, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fungal-type cell wall (1->3)-alpha-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Alpha-1,3-glucan synthase, putative
XP_003195069.1
  • Similar to TIGR gene model, INSD accession AAW44814.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014944.1 Reference assembly

    Range
    80406..88392 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003195021.1 → XP_003195069.1  Alpha-1,3-glucan synthase, putative [Cryptococcus gattii WM276]

    See identical proteins and their annotated locations for XP_003195069.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E6R8V6
    Conserved Domains (5) summary
    cd03791
    Location:1167 → 1624
    GT1_Glycogen_synthase_DULL1_like; This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family ...
    cd11323
    Location:16 → 590
    AmyAc_AGS; Alpha amylase catalytic domain found in Alpha 1,3-glucan synthase (also called uridine diphosphoglucose-1,3-alpha-glucan glucosyltransferase and 1,3-alpha-D-glucan synthase)
    COG0297
    Location:1994 → 2409
    GlgA; Glycogen synthase [Carbohydrate transport and metabolism]
    COG0366
    Location:109 → 576
    AmyA; Glycosidase [Carbohydrate transport and metabolism]
    PRK14099
    Location:1184 → 1646
    PRK14099; glycogen synthase; Provisional
Nucleotide Protein
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