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LOC101906447 galactosylceramide sulfotransferase-like [ Bos taurus (domestic cattle) ]

Gene ID: 101906447, updated on 4-Oct-2024

Summary

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Gene symbol
LOC101906447
Gene description
galactosylceramide sulfotransferase-like
See related
Ensembl:ENSBTAG00000014232
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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Genomic context

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See LOC101906447 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (69494446..69509308, complement)

Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene SEC14 like lipid binding 4 Neighboring gene putative SEC14-like protein 6 Neighboring gene SEC14 like lipid binding 6 Neighboring gene uncharacterized LOC112442058 Neighboring gene galactose-3-O-sulfotransferase 1 Neighboring gene transfer RNA serine (anticodon GGA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myelination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylceramide sulfotransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    69494446..69509308 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024977825.2 → XP_024833593.1  galactosylceramide sulfotransferase-like isoform X3

    Conserved Domains (1) summary
    pfam06990
    Location:17 → 422
    Gal-3-0_sulfotr; Galactose-3-O-sulfotransferase

  2. XM_024977826.2 → XP_024833594.1  galactosylceramide sulfotransferase-like isoform X4

    UniProtKB/TrEMBL
    F1MRV6
    Related
    ENSBTAP00000048547.4, ENSBTAT00000053943.4
    Conserved Domains (1) summary
    pfam06990
    Location:17 → 421
    Gal-3-0_sulfotr; Galactose-3-O-sulfotransferase

  3. XM_059876432.1 → XP_059732415.1  galactosylceramide sulfotransferase-like isoform X5

  4. XM_024977824.2 → XP_024833592.1  galactosylceramide sulfotransferase-like isoform X2

    Conserved Domains (1) summary
    pfam06990
    Location:32 → 436
    Gal-3-0_sulfotr; Galactose-3-O-sulfotransferase

  5. XM_024977823.2 → XP_024833591.1  galactosylceramide sulfotransferase-like isoform X1

    Conserved Domains (1) summary
    pfam06990
    Location:32 → 437
    Gal-3-0_sulfotr; Galactose-3-O-sulfotransferase
Nucleotide Protein
Heading Accession and Version

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