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kirre kin of irre [ Musca domestica (house fly) ]

Gene ID: 101899537, updated on 22-Jun-2024

Summary

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Gene symbol
kirre
Gene description
kin of irre
See related
VectorBase:MDOMA2_009244
Gene type
protein coding
RefSeq status
MODEL
Organism
Musca domestica
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Musca
Orthologs
fruit fly all
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Genomic context

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See kirre in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_08 current Musca_domestica.polishedcontigs.V.1.1 (GCF_030504385.1) Unplaced Scaffold NW_026712249.1 (4299223..4400704, complement)
102 previous assembly Musca_domestica-2.0.2 (GCF_000371365.1) Unplaced Scaffold NW_004765179.1 (35475..41740)

NW_026712249.1Genomic Context describing neighboring genes Neighboring gene ATPase phospholipid transporting 8B Neighboring gene uncharacterized LOC131802158 Neighboring gene uncharacterized LOC131802159 Neighboring gene Cyclin-dependent kinase 7 Neighboring gene uncharacterized LOC131802238 Neighboring gene uncharacterized LOC101900729

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptomic analysis of the housefly (Musca domestica) larva using massively parallel pyrosequencing. Liu F, et al. Mol Biol Rep, 2012 Feb. PMID 21643958
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
irregular chiasm C-roughest protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030504385.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Musca_domestica.polishedcontigs.V.1.1 Primary Assembly

Genomic

  1. NW_026712249.1 Reference Musca_domestica.polishedcontigs.V.1.1 Primary Assembly

    Range
    4299223..4400704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059121693.1 → XP_058977676.1  irregular chiasm C-roughest protein isoform X2

  2. XM_059121692.1 → XP_058977675.1  irregular chiasm C-roughest protein isoform X1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases