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Asph Aspartyl beta-hydroxylase [ Musca domestica (house fly) ]

Gene ID: 101896755, updated on 22-Jun-2024

Summary

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Gene symbol
Asph
Gene description
Aspartyl beta-hydroxylase
See related
VectorBase:MDOMA2_008446
Gene type
protein coding
RefSeq status
MODEL
Organism
Musca domestica
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Musca
Orthologs
fruit fly all
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Genomic context

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See Asph in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_08 current Musca_domestica.polishedcontigs.V.1.1 (GCF_030504385.1) Unplaced Scaffold NW_026712409.1 (23221240..23242609, complement)
102 previous assembly Musca_domestica-2.0.2 (GCF_000371365.1) Unplaced Scaffold NW_004764825.1 (325182..346561, complement)

NW_026712409.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101896455 Neighboring gene uncharacterized LOC101896636 Neighboring gene CDGSH iron-sulfur domain-containing protein 3, mitochondrial Neighboring gene microtubule-associated protein RP/EB family member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptomic analysis of the housefly (Musca domestica) larva using massively parallel pyrosequencing. Liu F, et al. Mol Biol Rep, 2012 Feb. PMID 21643958

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA ligase 1; glutamic acid-rich protein; probable serine/threonine-protein kinase kinX

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030504385.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Musca_domestica.polishedcontigs.V.1.1 Primary Assembly

Genomic

  1. NW_026712409.1 Reference Musca_domestica.polishedcontigs.V.1.1 Primary Assembly

    Range
    23221240..23242609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059130766.1 → XP_058986749.1  glutamic acid-rich protein isoform X1

    UniProtKB/TrEMBL
    T1P9W7

  2. XM_059130765.1 → XP_058986748.1  glutamic acid-rich protein isoform X1

    UniProtKB/TrEMBL
    T1P9W7

  3. XM_059130768.1 → XP_058986751.1  glutamic acid-rich protein isoform X3

    UniProtKB/TrEMBL
    T1PKQ9

  4. XM_059130769.1 → XP_058986752.1  probable serine/threonine-protein kinase kinX isoform X5

    UniProtKB/TrEMBL
    T1P9W7

  5. XM_059130767.1 → XP_058986750.1  DNA ligase 1 isoform X2

    UniProtKB/TrEMBL
    T1P9W7

  6. XM_059130770.1 → XP_058986753.1  DNA ligase 1 isoform X6

    UniProtKB/TrEMBL
    T1PKQ9

  7. XM_020036034.2 → XP_019891593.1  glutamic acid-rich protein isoform X4

    UniProtKB/TrEMBL
    A0A9J7DDV7, T1P9W7

  8. XM_005181446.4 → XP_005181503.1  DNA ligase 1 isoform X7

    UniProtKB/TrEMBL
    A0A1I8MQ54, T1P9W7

  9. XM_005181447.4 → XP_005181504.1  DNA ligase 1 isoform X8

    UniProtKB/TrEMBL
    A0A1I8MQ49, T1PKQ9

RNA

  1. XR_009344081.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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