U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101889177 cobalamin trafficking protein CblD [ Musca domestica (house fly) ]

Gene ID: 101889177, updated on 22-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
LOC101889177
Gene description
cobalamin trafficking protein CblD
See related
VectorBase:MDOMA2_003056
Gene type
protein coding
RefSeq status
MODEL
Organism
Musca domestica
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Musca
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC101889177 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_08 current Musca_domestica.polishedcontigs.V.1.1 (GCF_030504385.1) Unplaced Scaffold NW_026712249.1 (3301573..3303097, complement)
102 previous assembly Musca_domestica-2.0.2 (GCF_000371365.1) Unplaced Scaffold NW_004764779.1 (346829..348394, complement)

NW_026712249.1Genomic Context describing neighboring genes Neighboring gene Ubiquitin specific protease 2 Neighboring gene uncharacterized LOC131802152 Neighboring gene uncharacterized LOC101888999 Neighboring gene COMM domain-containing protein 3 Neighboring gene probable RNA-binding protein 19 Neighboring gene active breakpoint cluster region-related protein Neighboring gene alanine--glyoxylate aminotransferase

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Transcriptomic analysis of the housefly (Musca domestica) larva using massively parallel pyrosequencing. Liu F, et al. Mol Biol Rep, 2012 Feb. PMID 21643958
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cobalamin trafficking protein CblD
Names
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030504385.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Musca_domestica.polishedcontigs.V.1.1 Primary Assembly

Genomic

  1. NW_026712249.1 Reference Musca_domestica.polishedcontigs.V.1.1 Primary Assembly

    Range
    3301573..3303097 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005180971.4 → XP_005181028.1  cobalamin trafficking protein CblD isoform X2

    UniProtKB/TrEMBL
    A0A1I8M561
    Conserved Domains (1) summary
    pfam10229
    Location:80 → 264
    DUF2246; Uncharacterized conserved protein (DUF2246)

  2. XM_005180970.4 → XP_005181027.1  cobalamin trafficking protein CblD isoform X1

    UniProtKB/TrEMBL
    A0A1I8M565
    Conserved Domains (1) summary
    pfam10229
    Location:80 → 265
    DUF2246; Uncharacterized conserved protein (DUF2246)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases