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CGB_A5060C Carnitine/acyl carnitine carrier, putative [ Cryptococcus gattii WM276 ]

Gene ID: 10188320, updated on 6-Jun-2024

Summary

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Gene symbol
CGB_A5060C
Gene description
Carnitine/acyl carnitine carrier, putative
Locus tag
CGB_A5060C
See related
FungiDB:CGB_A5060C; VEuPathDB:CGB_A5060C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus gattii WM276 (strain: WM276, serotype: B)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex
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Genomic context

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See CGB_A5060C in Genome Data Viewer
Location:
chromosome: A
Exon count:
7
Sequence:
Chromosome: A; NC_014938.1 (1007481..1008805, complement)

Chromosome A - NC_014938.1Genomic Context describing neighboring genes Neighboring gene Osmotic stress-related protein, putative Neighboring gene Phosphoprotein phosphatase, putative Neighboring gene Ptc1 protein phosphatase type 2C, putative Neighboring gene Hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014938.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. D'Souza CA, et al. mBio, 2011. PMID 21304167, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Carnitine/acyl carnitine carrier, putative
XP_003191540.1
  • Similar to TIGR gene model, INSD accession AAW41054.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014938.1 Reference assembly

    Range
    1007481..1008805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003191492.1 → XP_003191540.1  Carnitine/acyl carnitine carrier, putative [Cryptococcus gattii WM276]

    See identical proteins and their annotated locations for XP_003191540.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E6QXV1
    Conserved Domains (1) summary
    pfam00153
    Location:117 → 207
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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