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LOC101882239 beta-1,3-galactosyltransferase 2 [ Danio rerio (zebrafish) ]

Gene ID: 101882239, updated on 12-Sep-2024

Summary

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Gene symbol
LOC101882239
Gene description
beta-1,3-galactosyltransferase 2
See related
Ensembl:ENSDARG00000087979
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See LOC101882239 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (11976262..11981180, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (12192663..12194782, complement)

Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene abhydrolase domain containing 3, phospholipase Neighboring gene Ro60, Y RNA binding protein Neighboring gene cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) Neighboring gene potassium channel, subfamily T, member 2a Neighboring gene uncharacterized LOC137487672 Neighboring gene G protein-coupled receptor 158b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007113.7 Reference GRCz11 Primary Assembly

    Range
    11976262..11981180 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017351363.3 → XP_017206852.2  beta-1,3-galactosyltransferase 2

    UniProtKB/TrEMBL
    A0A8M6Z152
    Related
    ENSDART00000154280.2
    Conserved Domains (1) summary
    pfam01762
    Location:142 → 336
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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