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CGB_N3200W Chitin synthase 6 [ Cryptococcus gattii WM276 ]

Gene ID: 10186817, updated on 26-Jun-2024

Summary

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Gene symbol
CGB_N3200W
Gene description
Chitin synthase 6
Locus tag
CGB_N3200W
See related
FungiDB:CGB_N3200W; VEuPathDB:CGB_N3200W
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus gattii WM276 (strain: WM276, serotype: B)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex
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Genomic context

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See CGB_N3200W in Genome Data Viewer
Location:
chromosome: N
Exon count:
25
Sequence:
Chromosome: N; NC_014951.1 (576363..580777)

Chromosome N - NC_014951.1Genomic Context describing neighboring genes Neighboring gene Hexose transport-related protein, putative Neighboring gene Hypothetical Protein Neighboring gene uncharacterized protein Neighboring gene Adenosine kinase, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014951.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. D'Souza CA, et al. mBio, 2011. PMID 21304167, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Chitin synthase 6
XP_003197600.1
  • Similar to TIGR gene model, INSD accession AAW47172.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014951.1 Reference assembly

    Range
    576363..580777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003197552.1 → XP_003197600.1  Chitin synthase 6 [Cryptococcus gattii WM276]

    See identical proteins and their annotated locations for XP_003197600.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E6RFL9
    Conserved Domains (5) summary
    COG1215
    Location:455 → 853
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam01644
    Location:345 → 506
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:278 → 343
    Chitin_synth_1N; Chitin synthase N-terminal
    cl11394
    Location:474 → 586
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    cl23807
    Location:50 → 129
    WWbp; WW-domain ligand protein
Nucleotide Protein
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