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STAMBPL1 STAM binding protein like 1 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101867398, updated on 10-Oct-2024

Summary

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Gene symbol
STAMBPL1
Gene description
STAM binding protein like 1
See related
Ensembl:ENSMFAG00000002838
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
fas
Orthologs
human mouse all
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Genomic context

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See STAMBPL1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 9 NC_088383.1 (97751880..97811642)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 9 NC_052263.1 (84445344..84586604)

Chromosome 9 - NC_088383.1Genomic Context describing neighboring genes Neighboring gene lipase family member M Neighboring gene ankyrin repeat domain 22 Neighboring gene uncharacterized LOC123566832 Neighboring gene uncharacterized LOC135965150 Neighboring gene actin alpha 2, smooth muscle Neighboring gene Fas cell surface death receptor Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular cloning and characterization of cynomolgus monkey Fas. Murayama Y, et al. Hum Immunol, 2000 May. PMID 10773350
  2. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal-dependent deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K63-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AMSH-like protease
Names
death receptor Fas (APO-1/CD95)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088383.1 Reference T2T-MFA8v1.0

    Range
    97751880..97811642
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065521121.1 → XP_065377193.1  AMSH-like protease isoform X3

  2. XM_065521120.1 → XP_065377192.1  AMSH-like protease isoform X2

  3. XM_005565896.4 → XP_005565953.1  AMSH-like protease isoform X1

    See identical proteins and their annotated locations for XP_005565953.1

    UniProtKB/TrEMBL
    A0A7N9CGS2, I7GI26
    Related
    ENSMFAP00000032561.1
    Conserved Domains (3) summary
    cd08066
    Location:266 → 436
    MPN_AMSH_like; Mov34/MPN/PAD-1 family
    COG0544
    Location:119 → 197
    Tig; FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
    pfam08969
    Location:28 → 129
    USP8_dimer; USP8 dimerization domain

  4. XM_065521122.1 → XP_065377194.1  AMSH-like protease isoform X4

Nucleotide Protein
Heading Accession and Version

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