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LDHA L-lactate dehydrogenase A chain [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101867330, updated on 12-Jun-2024

Summary

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Gene symbol
LDHA
Gene description
L-lactate dehydrogenase A chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
LDH-A; LDH-M; QccE-13248; QflA-14835
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Genomic context

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See LDHA in Genome Data Viewer
Location:
chromosome: 17
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 17 NC_088391.1 (68320036..68321710)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 17 NC_052271.1 (57230593..57232238)

Chromosome 17 - NC_088391.1Genomic Context describing neighboring genes Neighboring gene F-box and leucine rich repeat protein 3 Neighboring gene MYC binding protein 2 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC135967983 Neighboring gene uncharacterized LOC135968030

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441
  2. Rate of evolution in brain-expressed genes in humans and other primates. Wang HY, et al. PLoS Biol, 2007 Feb. PMID 17194215, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-lactate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lactate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pyruvate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-lactate dehydrogenase A chain; LOW QUALITY PROTEIN: L-lactate dehydrogenase A chain-like
Names
LDH muscle subunit
lactate dehydrogenase-A
XP_045232953.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088391.1 Reference T2T-MFA8v1.0

    Range
    68320036..68321710
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045377018.2 → XP_045232953.1  LOW QUALITY PROTEIN: L-lactate dehydrogenase A chain-like

    Conserved Domains (1) summary
    cd05293
    Location:19 → 324
    LDH_1; A subgroup of L-lactate dehydrogenases

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001283551.1: Suppressed sequence

    Description
    NM_001283551.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
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